Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794984.1_cds_XP_016441859.1_3632
CDS Infomation

[gene=LOC107767374] [db_xref=GeneID:107767374] [protein=DNA-binding protein SMUBP-2-like isoform X2] [protein_id=XP_016441859.1] [location=complement(join(16967..17140,17237..17371,17442..17586,17756..17859,18006..18212,20076..20333,20542..20595,20972..21044,21685..21872,22804..22887,23135..23224,24298..24357))] [gbkey=CDS]
Sequence

ATGGGCAAGACACTGATGGAGCTTCAATCAACCAAAGGGGATATTCTTCCGCCTCACAAG
TTTGGCACTCATGACGTTGTTGTTCTGAAACCAAACAAAGCTGATTTAGGCTCCCCTGCA
CTTGGACAGGGGGTTGTCTACAGGCTAAAGGACTCATCTATTACTGTTGCTTTTGATGAT
GTCCCGGAAGAGGGTCTGAATAATCCTTTACGCCTTGAGAAGTTGGCAAATGAGAAAGAT
GCCATCTCAAAGGCGCTTTCATCCAAGAACGTAATTTTGCTGCATGGGCCTCCTGGAACT
GGGAAGACAACTACTGTTGTTGAGATTATTTTGCAGGAAGCGAAACGTGGTTCAAAGATC
CTTGCTTGTGCTGCTTCAAATATTGCTGTTGATAACATTGTTGAGAGACTTGTTCCACAC
AGAGTGAAGTTGGTGAGATTGGGACATCCGGCACGTATGCTCCCACAAGTACTGGATAGC
GCTCTTGATGCCCAGGTCCTACGTGGTGATAATAGTGCTCTTGCAAATGACATCCGCAAG
GAGATGAAGACATTGAATGGAAAGTTATTAAAAGCTAAAGATAGAAATGCAAAGAGAGAT
ATCAGGAGGGAGCTCAAGGCTCTTTCAAAAGAAGAGCGTAAAAGGCAGCAGCTAGCAGTA
ACAGATGTTCTTAAGAATGCAGATGTAGTCCTGACAACATTGACTGGGGCATTGTCCAAG
AAGTTGGACGGCATGTCATATGATTTGGTTATTATTGATGAAGCTGCTCAGGCATTGGAA
ATAGCATGCTGGATTGCTTTATTGAAGGGATCAAGGTGTATATTGGCTGGAGATCATCTC
CAGCTTCCTCCAACCATTCAAAGTGTAGAAGCTGAGAAGAAAGGACTGGGAAAGACGCTT
TTTGAACGTTTAGCAGATTTATATGGAGATGAAATCACGTCTATGCTCACTGTTCAGTAC
CGCATGCATGAACTGATTATGAACTGGTCATCCGGAGAGCTGTATGATAATAAGATTGAA
GCCCATTCAAGTGTTGCTAGCCATATGTTATATCACCTTGAGGATGTGAAGAAAACACCT
TCCACTGAATCAACCCTTCTGCTCATAGACATAGCTGGGTGTGACATGGAAGACAAAAAG
GATGAGGAAGATAGCACATTGAATGAAGGTGAAGCTGAGGTTGCCATTGCCCATGCAAAG
AGACTAGTCGAAAGCGGAGTCCGAGCTTCTGATATTGGATTAATCACTCCTTATGCAGCA
CAGGTTGTTTTCTTGAAAAAGCTCAAAAGCAATGAAGACAAATTAAAAGAAATGGAGATC
TCAACTGTTGATGGTTTCCAGGGTCGAGAAAAAGAAGCCATTATCATTTCTATGGTCCGA
TCAAACTCAAAGAAAGAGGTGGGATTTCTTAGTGACAGAAGGAGAATGAATGTTGCTGTT
ACACGAGCAAGGAGACAGTGCTGTCTTGTATGTGATACTGAGACAGTCAGTGGTGATAAA
TTCTTGAAGAGGTTGATTGAGTACTTTGAGGAGCATGGTGAATATTTGAGTGCTTCGGAG
TATGGAAATTAA

Peptide Sequence

PEP ID

XP_016441859.1
PEP Infomation

PREDICTED: DNA-binding protein SMUBP-2-like isoform X2 [Nicotiana tabacum]
Sequence

MGKTLMELQSTKGDILPPHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITVAFDD
VPEEGLNNPLRLEKLANEKDAISKALSSKNVILLHGPPGTGKTTTVVEIILQEAKRGSKI
LACAASNIAVDNIVERLVPHRVKLVRLGHPARMLPQVLDSALDAQVLRGDNSALANDIRK
EMKTLNGKLLKAKDRNAKRDIRRELKALSKEERKRQQLAVTDVLKNADVVLTTLTGALSK
KLDGMSYDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGKTL
FERLADLYGDEITSMLTVQYRMHELIMNWSSGELYDNKIEAHSSVASHMLYHLEDVKKTP
STESTLLLIDIAGCDMEDKKDEEDSTLNEGEAEVAIAHAKRLVESGVRASDIGLITPYAA
QVVFLKKLKSNEDKLKEMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAV
TRARRQCCLVCDTETVSGDKFLKRLIEYFEEHGEYLSASEYGN

Transcript Sequence

Gene sequence data has not been registered.